Multilocus sequence typing analysis of Italian Xanthomonas campestris pv. campestris strains suggests the evolution of local endemic populations of the pathogen and does not correlate with race distribution

Xanthomonas campestris pv. campestris (Xcc) is the causal agent of black rot in Brassicaceae. It is widespread in Italy and severe outbreaks occur under conditions that favour disease development. In this study a multilocus sequence typing approach (MLST) based on the partial sequence of seven loci was applied to a selection of strains representative of the main areas of cultivation and hosts. The aim was to investigate whether the long tradition of brassica crops in Italy has influenced the evolution of different Xcc populations. All loci were polymorphic; 14 allelic profiles were identified of which 13 were unique to Italian strains. Based on the seven loci, the most common genotype within the Italian Xcc strains (AP1) was also the most representative genotype found in worldwide Xcc strains. This genotype was included in a new clonal complex in addition to three other clonal complexes already identified in Xcc populations. The phylogenetic reconstruction using a concatenated dataset of four conserved protein-coding genes, dnaK, fuyA, gyrB and rpoD, showed that the Italian strains belonged to two genetic groups. Physiological races were also investigated for the first time in Italy. The race structure of Xcc was determined by inoculating eight differential Brassica lines belonging to five species and showed that, in Italy, race 4 is the most widespread, followed by races 1 and 6. No correlation was found between allelic profiles, host of isolation, geographical origin and races, although a prevalent race was identified within the same clonal complex.     

Growth pattern of Juncus effusus and Juncus conglomeratus in response to cutting frequency

Increasing abundance of Juncus effusus (soft rush) and Juncus conglomeratus (compact rush) in pastures and meadows in western Norway has caused reductions in forage yield and quality in recent decades. Understanding plant development and regrowth following cutting is essential in devising cost‐effective means to control rushes. In a field experiment in western Norway, we investigated development of above‐ and below‐ground fractions of rush from seedlings to three‐year‐old plants, including the impact on vigour of disturbing growth by different cutting frequencies during the period 2009–2012. Each year, the plants were exposed to one or two annual cuts or left untreated and five destructive samplings were performed from March to early December. Juncus effusus showed significantly more vigorous growth than Juncus conglomeratus in the last two years of the study period. The above‐ground:below‐ground biomass ratio of both species increased mainly in spring and early summer and was reduced in late summer and autumn. Removal of aerial shoots also reduced the below‐ground fraction of both species. One annual cut in July effectively reduced biomass production in both species by 30–82%, which was only a slightly smaller reduction than with two annual cuts, in June and August. Mechanical control measures such as cutting can thus effectively reduce rush vigour when performed late in the growing season.     

Stable isotopes and gut contents indicate differential resource use by coexisting asp (Leuciscus aspius) and pikeperch (Sander lucioperca)

Differential use of habitat and prey resources is an important mechanism that may allow coexistence of sympatric species. Unlike interactions between smaller cyprinid and percid fishes, the resource use by coexisting predatory asp (Leuciscus aspius) and pikeperch (Sander lucioperca) is relatively unknown. Here, gut content and stable isotope analyses were used to study ontogenetic dietary shifts and interspecific trophic niche overlap between asp and pikeperch coexisting in two reservoirs. The hypothesis that both species show an ontogenetic dietary shift from small invertebrates to large fish prey, but at the same time use different prey resources to reduce potential competitive interactions, was validated. The isotopic niches of the two predators showed no, or only a moderate, degree of overlap (0%–65%). The ontogenetic changes in the degree of interspecific isotopic niche overlap were different in the two reservoirs, suggesting that trophic segregation can be dynamic and variable among systems. Gut contents revealed that small (<100 mm standard length) asp consumed mostly terrestrial invertebrates and emerged aquatic insects, whereas small pikeperch foraged on zooplankton, larval and pupal stages of aquatic insects and fish. Larger individuals (>100 mm) of both species were predominantly piscivorous, with asp consuming more cyprinid prey and pikeperch more percid prey. Coexisting asp and pikeperch populations are able to utilise different prey resources, thereby reducing potential negative competitive interactions.     

Forest succession and climate variability interacted to control fire activity over the last four centuries in an Alaskan boreal landscape

Context

The boreal forest is globally important for its influence on Earth’s energy balance, and its sensitivity to climate change. Ecosystem functioning in boreal forests is shaped by fire activity, so anticipating the impacts of climate change requires understanding the precedence for, and consequences of, climatically induced changes in fire regimes. Long-term records of climate, fire, and vegetation are critical for gaining this understanding.

Objectives

We investigated the relative importance of climate and landscape flammability as drivers of fire activity in boreal forests by developing high-resolution records of fire history, and characterizing their centennial-scale relationships to temperature and vegetation dynamics.

Methods

We reconstructed the timing of fire activity in interior Alaska, USA, using seven lake-sediment charcoal records spanning CE 1550–2015. We developed individual and composite records of fire activity, and used correlations and qualitative comparisons to assess relationships with existing records of vegetation and climate.

Results

Our records document a dynamic relationship between climate and fire. Fire activity and temperature showed stronger coupling after ca. 1900 than in the preceding 350 yr. Biomass burning and temperatures increased concurrently during the second half of the twentieth century, to their highest point in the record. Fire activity followed pulses in black spruce establishment.

Conclusions

Fire activity was facilitated by warm temperatures and landscape-scale dominance of highly flammable mature black spruce, with a notable increase in temperature and fire activity during the twenty-first century. The results suggest that widespread burning at landscape scales is controlled by a combination of climate and vegetation dynamics that together drive flammability.

     

Ecosystems say good management pays off

Understanding the strengths and weaknesses of alternative assessment methods, harvest strategies and management approaches are an important part of operationalizing single‐species and ecosystem‐based fisheries management. Simulations run using two variants of a whole‐of‐ecosystem model for the Southern and Eastern Scalefish and Shark Fishery (SESSF) area shows that (a) data‐rich assessments outperform data‐poor assessments for target species and that this performance is reflected in the values of many system‐level ecosystem indicators; (b) ecosystem and multispecies management outperforms single‐species management applied over the same domain; (c) investment in robust science‐based fisheries management pays dividends even when there are multiple jurisdictions, some of which are not implementing effective management; and (d) that multispecies yield‐oriented strategies can deliver higher total catches without a notable decline in overall system performance, although the resulting system structure is different to that obtained with other forms of ecosystem‐based management.     

Linking mesoscale landscape heterogeneity and biodiversity: gardens and tree cover significantly modify flower-visiting beetle communities

Landscape Ecology - Maintaining biodiversity in multifunction landscapes is a significant challenge. Planning for the impacts of change requires knowledge of how species respond to landscape...     

Ray blight of pyrethrum in Australia: a review of the current status and future opportunities

Ray blight caused by Stagonosporopsis tanaceti is one of the most important diseases of pyrethrum (Tanacetum cinerariifolium), a perennial herbaceous plant cultivated for the extraction of insecticidal pyrethrins in Australia. The disease is responsible for complete yield loss in severe outbreaks. Infected seed is considered as the principal source of S. tanaceti. Infection hyphae remain only in the seed coat and not in the embryo, resulting in pre- and post-emergence death of seedlings and latent infection. Therefore, quantification of the level of infection by S. tanaceti within seed using a qPCR assay is important for efficient management of the disease. Stagonosporopsis tanaceti completes its life cycle within 12 days after leaf infection through production of pycnidia and can infect every tissue of the pyrethrum plant except the vascular and root tissues. Ray blight epidemics occur in pyrethrum fields through splash dispersal of pycnidiospores between adjacent plants. Besides steam sterilization, thiabendazole/thiram and fludioxonil are effective seed-treating chemicals in controlling S. tanaceti before planting begins. Ray blight is currently managed in the field through the foliar application of strobilurin fungicides in the first 1–2 years of crop establishment. Later on, difenoconazole and multisite specific fungicides in the next 2–3 years during early spring successfully reduce ray blight infestation. Avoiding development of resistance to fungicides will require more sustainable management of ray blight including the development and deployment of resistant cultivars.     

New Pseudococcidae species on Cupressus macrocarpa in Tunisia: first report of Planococcus vovae

In May 2017 and 2018, Planococcus vovae (Nasonov) (Hemiptera: Pseudococcidae) was collected in Hammam Sousse (Tunisia) on the ornamental plant Cupressus macrocarpa (Cupressaceae). The infestation was observed on needles which showed symptoms of desiccation and chlorosis. This is the first record of P. vovae in Tunisia and in North Africa.